Uses of Class
com.metsci.glimpse.dnc.DncCoverage

Packages that use DncCoverage

Package	Description
com.metsci.glimpse.dnc
com.metsci.glimpse.dnc.convert

Uses of DncCoverage in com.metsci.glimpse.dnc

Fields in com.metsci.glimpse.dnc declared as DncCoverage

Modifier and Type	Field	Description
DncCoverage	DncChunks.DncChunkKey.coverage

Fields in com.metsci.glimpse.dnc with type parameters of type DncCoverage

Modifier and Type	Field	Description
static Comparator<DncCoverage>	DncPainterUtils.coverageSignificanceComparator

Methods in com.metsci.glimpse.dnc with parameters of type DncCoverage

Modifier and Type	Method	Description
void	DncPainter.activateCoverage(DncCoverage coverage)
void	DncPainter.deactivateCoverage(DncCoverage coverage)
void	DncPainter.setCoverageActive(DncCoverage coverage, boolean active)

Method parameters in com.metsci.glimpse.dnc with type arguments of type DncCoverage

Modifier and Type	Method	Description
void	DncPainter.activateCoverages(Collection<DncCoverage> coverages)
void	DncPainter.deactivateCoverages(Collection<DncCoverage> coverages)
void	DncPainter.setCoveragesActive(Collection<DncCoverage> coverages, boolean active)

Constructors in com.metsci.glimpse.dnc with parameters of type DncCoverage

Constructor	Description
DncChunkKey(DncLibrary library, DncCoverage coverage)

Uses of DncCoverage in com.metsci.glimpse.dnc.convert

Fields in com.metsci.glimpse.dnc.convert with type parameters of type DncCoverage

Modifier and Type	Field	Description
List<DncCoverage>	Flat2Query.QueryCache.coverages
List<DncCoverage>	Flat2Render.RenderCache.coverages

Methods in com.metsci.glimpse.dnc.convert that return types with arguments of type DncCoverage

Modifier and Type	Method	Description
static List<DncCoverage>	Query.readQueryCoveragesFile(File file, Charset charset)
static List<DncCoverage>	Render.readRenderCoveragesFile(File file, Charset charset)

Methods in com.metsci.glimpse.dnc.convert with parameters of type DncCoverage

Modifier and Type	Method	Description
Flat2Query.Tree	Flat2Query.QueryDatabase.createTree(DncLibrary library, DncCoverage coverage)